released

PKBDO3506LYEI

released

RRID RRID:SAMN19776468Program Donor ID SAMN19776468

Clinical summary

Diabetes status

Control Without Diabetes

BMI

21.9

HbA1c %

5.3

C-Peptide (ng/ml)

4.75

Diabetes duration

—

Demographics

Age (y): 35
Gender: Female
Genetic Sex: Female
Ethnicity: White
Predicted genetic ancestry: European (95%), African (2%), Admixed-American (2%), East-Asian (1%)

Additional clinical

Diabetes (ontology): No ontology term
T1D stage: No sufficient information to derive
Derived diabetes status: Normal
Family history of diabetes: TRUE
Family history relationship: Mother
Living donor: No
Cause of death: Cerebrovascular/Stroke
Donation type: Donation after brain death
Hospital stay (h): 7

Autoantibodies

GADANegative

0 unit/ml

IAANegative

0 unit/ml

IA2Negative

0 unit/ml

ZNT8Negative

0.002 unit/ml

HLA typing

Locus	Allele 1	Allele 2	Method
A	01:01	02:01	NGS
A	1	2	RT-PCR
B	35	55	RT-PCR
B	35:05	55:01	NGS
Bw4	0	0	RT-PCR
Bw6	1	1	RT-PCR
C	03:03	04:01	NGS
C	09	04	RT-PCR
DPA1	01:03	—	NGS
DPB1	03:01	16:01	NGS
DPB1	03:01	16:01	RT-PCR
DQA1	03	05	RT-PCR
DQA1	03:01	05:05	NGS
DQB1	03:01	03:02	NGS
DQB1	7	8	RT-PCR
DR	4	11	RT-PCR
DR51	0	0	RT-PCR
DR52	52	0	RT-PCR
DR53	53	0	RT-PCR
DRB1	04:04	11:01	NGS
DRB3	—	02:02	NGS
DRB4	01:03	—	NGS
DRB5	—	—	NGS

Data available

Genetics

GenotypingAccess dataset

HLA_typingAccess dataset

Islet

scRNAseqAccess dataset

FunctionAccess dataset

CyTofAccess dataset

Pancreas

histologyAccess dataset

CODEXAccess dataset

imaging_mass_specAccess dataset

Spleen

TCRseqAccess dataset

BCRseqAccess dataset

Flow_cytometryAccess dataset

histologyAccess dataset

Lymph

Flow_cytometryAccess dataset

histologyAccess dataset

Peripheral_blood

Flow_cytometryAccess dataset

Supplementary

HPAP

Identifiers

PANC-DB:HPAP-037

Pancreas tissue available: Yes
Other tissues: UBERON:0002048, UBERON:0002107, UBERON:0000948, UBERON:0002113, UBERON:0001264

Publication data

PMID:35228745, PMID:37582230

Publication identifiers

PMID:31127054, PMID:36206763

Description

Human pancreas donor SAMN19776468 in the HPAP database

External resources

PANC-DB:HPAP-037

URL

https://hpap.pmacs.upenn.edu/explore/donor/donor-summary/HPAP-037

Attribution