PKBDO3465MWBV
{
"@context": "/terms/",
"@id": "/human-donors/PKBDO3465MWBV/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"accession": "PKBDO3465MWBV",
"age": 57,
"aliases": [
"joyce-niland:SAMN08786195"
],
"audit": {
"WARNING": [
{
"category": "missing tier 1 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 1 field `sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier1_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 2 field `hba1c`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 2 field `hospital_stay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `genetic_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `c_peptide`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_gada`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_gada_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_ia2`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_ia2_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_iaa`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_iaa_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_iaa_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_znt8`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_znt8_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `derived_diabetes_status`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `data_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO3465MWBV](/human-donors/PKBDO3465MWBV/) is missing tier 3 field `related_donors`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO3465MWBV/"
}
]
},
"award": {
"@id": "/awards/U24DK098085/"
},
"bmi": 22,
"cause_of_death": "Cerebrovascular/stroke",
"center_donor_id": "SAMN08786195",
"collections": [
"IIDP"
],
"creation_timestamp": "2024-12-03T22:45:06.463701+00:00",
"dbxrefs": [
"IIDP:SAMN08786195"
],
"description": "Human donor SAMN08786195 in the IIDP database",
"diabetes_duration": "0-5",
"diabetes_status": [
"/phenotype-terms/MONDO_0005148/"
],
"diabetes_status_description": "type 2 diabetes",
"ethnicities": [
"White"
],
"family_history_of_diabetes_relationship": [
"-"
],
"gender": "female",
"hla_typing": [
"A,2-.,OPO",
"B,7-13,OPO",
"C,06-07,OPO",
"Bw4,1-.,OPO",
"Bw6,1-.,OPO",
"DR,7-103,OPO",
"DR51,0-.,OPO",
"DR52,0-.,OPO",
"DR53,1-.,OPO",
"DQ,2-5,OPO"
],
"human_donor_identifiers": [
"IIDP:SAMN08786195"
],
"lab": {
"@id": "/labs/joyce-niland/",
"title": "Joyce Niland, CoH"
},
"living_donor": false,
"notes": "Cohort ID:SAMN08786195",
"other_theraphy": [
"Oral medications"
],
"other_tissues_available": [],
"pancreas_tissue_available": false,
"publication_identifiers": [
"PMID:19366778",
"PMID:22889479",
"PMID:20447343"
],
"release_timestamp": "2025-01-10T01:33:29.545660+00:00",
"rrid": "RRID:SAMN08786195",
"schema_version": "20",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from IIDP",
"summary": "PKBDO3465MWBV",
"t1d_stage": "no sufficient information to derive",
"taxa": "Homo sapiens",
"url": "https://iidp.coh.org/Resources-Offered/Research-Data-Repository",
"uuid": "555fc8ec-4713-4497-9386-e79b91166a61",
"virtual": false
}
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
