PKBDO2128CNGD
{
"@context": "/terms/",
"@id": "/human-donors/PKBDO2128CNGD/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"accession": "PKBDO2128CNGD",
"age": 6,
"aliases": [
"klaus-kaestner:HPAP-033"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `hba1c`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `diabetes_status_hba1c`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `hospital_stay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 2 field `cause_of_death`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_desired_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `biological_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `diabetes_duration`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `c_peptide`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_gada`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_ia2`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_znt8`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `hla_typing`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `publication_identifiers`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `pancreas_tissue_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO2128CNGD](/human-donors/PKBDO2128CNGD/) is missing tier 3 field `url`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_optional_fields",
"path": "/human-donors/PKBDO2128CNGD/"
}
]
},
"award": {
"@id": "/awards/UC4DK112217/"
},
"bmi": 14.85,
"center_donor_id": "SAMN19776464",
"collections": [
"HPAP"
],
"creation_timestamp": "2024-12-03T20:15:47.834061+00:00",
"data_available": [
{
"dataset": "Genotyping",
"dataset_link": "https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs002465.v1.p1",
"dataset_tissue": "-"
},
{
"dataset": "HLA_typing",
"dataset_link": "https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs002465.v1.p1",
"dataset_tissue": "-"
},
{
"dataset": "Function",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Islet"
},
{
"dataset": "CyTof",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Islet"
},
{
"dataset": "histology",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Pancreas"
},
{
"dataset": "TCRseq",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Spleen"
},
{
"dataset": "BCRseq",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Spleen"
},
{
"dataset": "histology",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Spleen"
},
{
"dataset": "histology",
"dataset_link": "https://hpap.pmacs.upenn.edu",
"dataset_tissue": "Lymph"
}
],
"dbxrefs": [
"PANC-DB:HPAP-033"
],
"description": "Human donor SAMN19776464 in the HPAP database",
"diabetes_status": [],
"diabetes_status_description": "non-diabetic",
"human_donor_identifiers": [
"PANC-DB:HPAP-033"
],
"lab": {
"@id": "/labs/klaus-kaestner/",
"title": "Klaus Kaestner, UPenn"
},
"living_donor": false,
"notes": "Cohort_ID:HPAP-033",
"other_tissues_available": [],
"release_timestamp": "2025-01-10T01:41:08.236251+00:00",
"rrid": "RRID:SAMN19776464",
"schema_version": "16",
"sex": "male",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"summary": "male",
"taxa": "Homo sapiens",
"uuid": "f3b586fb-ac90-4dd5-97ae-4849f14b74de",
"virtual": false
}
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies