PKBDO1225NSNK
PKBDO1225NSNK
released
Clinical summary
Diabetes status
Control Without Diabetes
Age (y)
21
Age group
18-39
BMI
30.05
Height (cm)
—
Weight (kg)
—
HbA1c %
5.5
C-Peptide (ng/ml)
21.16
Diabetes duration
—
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 21
- Age group
- 18-39
- Pediatric
- No
- Gender
- Female
- Genetic Sex
- Female
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (96%), Admixed-American (2%), East-Asian (1%), African (1%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- No ontology term
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Normal
- Label vs HbA1c discordant
- No
- Tier 1 complete
- No
- Family history of diabetes
- TRUE
- Family history relationship
- Great_grandmother
- Living donor
- No
- Cause of death
- Head Trauma
- Donation type
- Donation after brain death
- Hospital stay (h)
- 127
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
1 unit/ml
IAANegative
0.002 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
-0.003 unit/ml
HLA typing
Status: X/X
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02 | 11 | RT-PCR |
| A | 02:20 | 11:01 | NGS |
| B | 44 | 44 | RT-PCR |
| B | 44:02 | — | NGS |
| Bw4 | 1 | 1 | RT-PCR |
| Bw6 | 0 | 0 | RT-PCR |
| C | 05 | 05 | RT-PCR |
| C | 05:01 | — | NGS |
| DPA1 | 01:03 | — | NGS |
| DPB1 | 03:01 | 79:01 | NGS |
| DPB1 | 03:01 | 79:01 | RT-PCR |
| DQA1 | 01 | 01 | RT-PCR |
| DQA1 | 01:01 | — | NGS |
| DQB1 | 05 | 05 | RT-PCR |
| DQB1 | 05:01 | — | NGS |
| DR | 01 | 01 | RT-PCR |
| DR51 | 0 | 0 | RT-PCR |
| DR52 | 0 | 0 | RT-PCR |
| DR53 | 0 | 0 | RT-PCR |
| DRB1 | 01:01 | — | NGS |
Data available
- Datasets
- Genotyping, HLA_typing, scRNAseq, Function, Imaging, CyTof, Histology, scMultiome, snATACseq, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph, Peripheral_blood
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
Pancreas
histologyAccess dataset
Spleen
scMultiomeAccess dataset
TCRseqAccess dataset
BCRseqAccess dataset
Flow_cytometryAccess dataset
histologyAccess dataset
Lymph
Peripheral_blood
Flow_cytometryAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-122
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-122
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
