PKBDO0749POII
{
"@context": "/terms/",
"@id": "/human-donors/PKBDO0749POII/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"aab_gada": false,
"aab_ia2": false,
"aab_iaa": true,
"aab_znt8": false,
"accession": "PKBDO0749POII",
"age": 33.8,
"aliases": [
"atkinson:6032"
],
"audit": {
"WARNING": [
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 2 field `hba1c`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 2 field `glucose_loweing_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 2 field `hospital_stay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 2 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 2 field `donation_type`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier2_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `dbxrefs`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `phenotypic_features`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `family_history_of_diabetes`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `family_history_of_diabetes_relationship`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `genetic_ethnicities`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `biological_sex`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_gada_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_gada_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_ia2_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_ia2_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_iaa_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_iaa_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_znt8_assay`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `aab_znt8_value`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `other_theraphy`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `documents`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `derived_diabetes_status`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `data_available`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
},
{
"category": "missing tier 3 field",
"detail": "Human donor [PKBDO0749POII](/human-donors/PKBDO0749POII/) is missing tier 3 field `related_donors`.",
"level": 40,
"level_name": "WARNING",
"name": "audit_tier3_fields",
"path": "/human-donors/PKBDO0749POII/"
}
]
},
"award": {
"@id": "/awards/3-SRA-2023-1417-S-B/"
},
"bmi": 29.4,
"c_peptide": 0.05,
"cause_of_death": "Anoxia",
"center_donor_id": "SAMN15879089",
"collections": [
"nPOD"
],
"creation_timestamp": "2024-12-03T23:59:06.773589+00:00",
"description": "Human donor SAMN15879089 in the nPOD database",
"diabetes_duration": "-",
"diabetes_status": [
"/phenotype-terms/MONDO_0005147/"
],
"diabetes_status_description": "type 1 diabetes",
"ethnicities": [
"White"
],
"hla_typing": [
"A,02:01-02:01,NGS",
"B,40:01-44:05,NGS",
"C,02:02-03:04,NGS",
"DRB1,03:01-04:01,NGS",
"DQA1,03:01-05:01,NGS",
"DQB1,02:01-03:02,NGS",
"DPA1,01:03-01:03,NGS",
"DPB1,03:01-04:02,NGS"
],
"human_donor_identifiers": [
"nPOD_portal:6032"
],
"lab": {
"@id": "/labs/mark-atkinson/",
"title": "Mark Atkinson, UFHealth"
},
"living_donor": false,
"notes": "Cohort_ID:6032;-",
"other_tissues_available": [],
"pancreas_tissue_available": true,
"publication_identifiers": [
"PMID:24325575",
"PMID:22585677"
],
"release_timestamp": "2025-01-10T01:36:48.269462+00:00",
"rrid": "RRID:SAMN15879089",
"schema_version": "18",
"sex": "male",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitter_comment": "Meta-data was obtained directly from the nPOD portal",
"summary": "White male /phenotype-terms/MONDO_0005147/",
"t1d_stage": "Stage 3: One or more autoantibodies and diagnostic hyperglycemia or T1D diagnosis",
"taxa": "Homo sapiens",
"url": "https://portal.jdrfnpod.org/",
"uuid": "f930e08b-ceeb-4199-8472-4e944d14d211",
"virtual": false
}
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
