released

PKBDO0625TZQX

released

RRID RRID:SAMN22562806Program Donor ID SAMN22562806

Clinical summary

Diabetes status

Control Without Diabetes

BMI

34.32

HbA1c %

4.9

C-Peptide (ng/ml)

4.13

Diabetes duration

—

Demographics

Age (y): 23
Gender: Female
Genetic Sex: Female
Ethnicity: African American
Predicted genetic ancestry: African (97%), Admixed-American (3%)

Additional clinical

Diabetes (ontology): No ontology term
T1D stage: No sufficient information to derive
Derived diabetes status: Normal
Family history of diabetes: TRUE
Family history relationship: Maternal_grandmother, Paternal_grandmother
Living donor: No
Cause of death: Anoxia
Donation type: Donation after brain death
Hospital stay (h): 167

Autoantibodies

GADANegative

0 unit/ml

IAANegative

0.001 unit/ml

IA2Negative

0 unit/ml

ZNT8Negative

-0.004 unit/ml

HLA typing

Status: X/X

Locus	Allele 1	Allele 2	Method
A	23	33	RT-PCR
A	23:01	33:01	NGS
B	15:03	41:02	NGS
B	72	41	RT-PCR
Bw4	0	0	RT-PCR
Bw6	1	1	RT-PCR
C	02	17	RT-PCR
C	02:10	17:01	NGS
DPA1	02:01	03:01	NGS
DPB1	105:01	13:01	RT-PCR
DPB1	13:01	105:01	NGS
DQA1	01	05	RT-PCR
DQA1	01:02	05:05	NGS
DQB1	06:09	03:19	NGS
DQB1	7	6	RT-PCR
DR	13	13	RT-PCR
DR51	0	0	RT-PCR
DR52	0	0	RT-PCR
DR53	52	52	RT-PCR
DRB1	13:02	13:04	NGS
DRB3	03:01	02:02	NGS
DRB4	—	—	NGS
DRB5	—	—	NGS

Data available

Genetics

GenotypingAccess dataset

HLA_typingAccess dataset

Islet

RNAseqAccess dataset

scRNAseqAccess dataset

FunctionAccess dataset

ImagingAccess dataset

CyTofAccess dataset

Pancreas

histologyAccess dataset

CODEXAccess dataset

imaging_mass_specAccess dataset

Spleen

TCRseqAccess dataset

BCRseqAccess dataset

CITEseqAccess dataset

Flow_cytometryAccess dataset

histologyAccess dataset

Lymph

CITEseqAccess dataset

Flow_cytometryAccess dataset

histologyAccess dataset

Peripheral_blood

Flow_cytometryAccess dataset

Supplementary

HPAP

Identifiers

PANC-DB:HPAP-095

Pancreas tissue available: Yes
Other tissues: UBERON:0002048, UBERON:0002107, UBERON:0000948, UBERON:0002113, UBERON:0001264

Publication identifiers

PMID:31127054, PMID:36206763

Description

Human pancreas donor SAMN22562806 in the HPAP database

External resources

PANC-DB:HPAP-095

URL

https://hpap.pmacs.upenn.edu/explore/donor/donor-summary/HPAP-095

Attribution