PKBDO0568QTGJ
PKBDO0568QTGJ
released
Clinical summary
Diabetes status
Type 2 Diabetes
Age (y)
47
Age group
40-64
BMI
32.2
Height (cm)
—
Weight (kg)
—
HbA1c %
5.7
C-Peptide (ng/ml)
0.43
Diabetes duration
18
AAB summary
none positive
AAB count
0
Demographics
- Age (y)
- 47
- Age group
- 40-64
- Pediatric
- No
- Gender
- Male
- Genetic Sex
- Male
- Sex discordant
- No
- Ethnicity
- White
- Predicted genetic ancestry
- European (100%)
- Dominant genetic ancestry
- European
Additional clinical
- Diabetes (ontology)
- T1D stage
- No sufficient information to derive
- HbA1c-derived diabetes status
- Prediabetes
- Label vs HbA1c discordant
- No
- Tier 1 complete
- Yes
- Family history of diabetes
- TRUE
- Family history relationship
- Father
- Living donor
- No
- Cause of death
- Cerebrovascular/Stroke
- Donation type
- Donation after brain death
- Hospital stay (h)
- 40
- Medication
- Metformin
Autoantibodies
- Summary
- none positive
- Any positive
- No
- Tested
- Yes
- Positive count
- 0
GADANegative
0 unit/ml
IAANegative
0.003 unit/ml
IA2Negative
0 unit/ml
ZNT8Negative
0 unit/ml
HLA typing
| Locus | Allele 1 | Allele 2 | Method |
|---|---|---|---|
| A | 02:01 | 03:01 | NGS |
| A | 2 | 3 | RT-PCR |
| A | 2 | 3 | SSO |
| B | 35 | 39 | RT-PCR |
| B | 35 | 39 | SSO |
| B | 35:01 | 39:06 | NGS |
| Bw | 6.0 | — | SSO |
| Bw4 | 0 | — | RT-PCR |
| Bw6 | 1 | — | RT-PCR |
| C | 04:01 | 12:03 | NGS |
| C | 4 | 12 | RT-PCR |
| C | 4 | 12 | SSO |
| DPA1 | 01:03 | — | NGS |
| DPA1 | 01:03 | — | SSO |
| DPB | 04:01 | 04:02 | SSO |
| DPB1 | 04:01 | 04:02 | RT-PCR |
| DPB1 | 04:01G | 04:02G | NGS |
| DQA | 1.0 | — | SSO |
| DQA1 | 01 | — | RT-PCR |
| DQA1 | 01:01 | 01:02 | NGS |
| DQB | 5.0 | — | SSO |
| DQB1 | 05:01 | 05:02 | NGS |
| DQB1 | 5 | — | RT-PCR |
| DR | 1 | 16 | RT-PCR |
| DR51 | 1 | — | RT-PCR |
| DR52 | 0 | — | RT-PCR |
| DR53 | 0 | — | RT-PCR |
| DRB1 | 01:01 | 16:01 | NGS |
| DRB1 | 1 | 16 | SSO |
| DRB5 | 02:02 | — | NGS |
| DRW | 51.0 | — | SSO |
Data available
- Datasets
- Genotyping, HLA_typing, RNAseq, ATAC-seq, Function, Morphology, CyTof, WGBS, Histology, CODEX, imaging_mass_spec, TCRseq, BCRseq, Flow_cytometry
- Tissues
- unspecified, Islet, Pancreas, Spleen, Lymph
Genetics
GenotypingAccess dataset
HLA_typingAccess dataset
Islet
RNAseqAccess dataset
ATAC-seqAccess dataset
FunctionAccess dataset
MorphologyAccess dataset
CyTofAccess dataset
WGBSAccess dataset
Pancreas
Spleen
Lymph
histologyAccess dataset
Supplementary
HPAP
PANC-DB:HPAP-001
- Pancreas tissue available
- Yes
- Other tissues
External resources
PANC-DB:HPAP-001
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
