{
"@context": "/terms/",
"@id": "/curated-sets/PKBDS1506CLWV/",
"@type": [
"CuratedSet",
"FileSet",
"Item"
],
"accession": "PKBDS1506CLWV",
"aliases": [
"kyle-gaulton:libraryResources_referenceFile_gencode_v39_GRCh38_annotation"
],
"assemblies": [
"GRCh38"
],
"audit": {
"ERROR": [
{
"category": "audit script error",
"detail": "audit_external_reference_files: NameError(\"name 'get_audit_message' is not defined\")",
"level": 60,
"level_name": "ERROR",
"name": "audit_external_reference_files",
"path": "/reference-files/PKBFI0723SUOK/"
}
]
},
"award": {
"@id": "/awards/U24DK138512-DK138515/",
"component": "data coordination",
"title": "A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515"
},
"control_for": [],
"creation_timestamp": "2025-11-04T21:42:20.605346+00:00",
"description": "GENCODE v39 gene annotation file for the GRCh38 human reference genome.",
"file_set_type": "transcriptome",
"files": [
{
"@id": "/reference-files/PKBFI0723SUOK/",
"accession": "PKBFI0723SUOK",
"aliases": [
"kyle-gaulton:referenceFile_gencode_v39_GRCh38_annotation"
],
"content_type": "genes_transcripts",
"creation_timestamp": "2025-03-06T18:23:22.951195+00:00",
"file_format": "gtf",
"href": "/reference-files/PKBFI0723SUOK/@@download/PKBFI0723SUOK.gtf.gz",
"submitted_file_name": "gencode.v39.GRCh38.annotation.gtf"
}
],
"input_file_set_for": [],
"lab": {
"@id": "/labs/pankbase-consortium/",
"title": "Pankbase Consortium, PanKbase"
},
"release_timestamp": "2025-11-11T01:01:37.996738+00:00",
"schema_version": "7",
"status": "released",
"submitted_by": {
"@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
"title": "Ying Sun"
},
"submitted_files_timestamp": "2025-03-06T18:23:22.951195+00:00",
"summary": "GRCh38 transcriptome",
"uuid": "f46ee8ef-dbdf-4058-b51a-4dafaed15ae7"
}