RNAseq GTEx pipeline RSEM transcript quantification step
Title
RNAseq GTEx pipeline RSEM transcript quantification step
Description
RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data.
Step Label
rsemtranscript-quantification-step
Analysis Step Types
signal generation
Workflow
Input Content Types
alignments, transcriptome alignments, sparse gene count matrix, sparse transcript count matrix
Output Content Types
signal
Parents
Aliases
kyle-gaulton:workflow_RNAseqPipelineForGTExConsortium_step6_RSEM
Submitter Comment
OUTPUT:gene quantifications;transcript quantifications
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies