RNAseq GTEx pipeline Picard mark duplicates step

{
    "@context": "/terms/",
    "@id": "/analysis-steps/PKBWF6231IPHV-picard-mark-duplicates-step/",
    "@type": [
        "AnalysisStep",
        "Item"
    ],
    "aliases": [
        "kyle-gaulton:workflow_RNAseqPipelineForGTExConsortium_step4_PicardMarkDuplicates"
    ],
    "analysis_step_types": [
        "file format conversion"
    ],
    "audit": {
        "INTERNAL_ACTION": [
            {
                "category": "mismatched status",
                "detail": "Released analysis step [PKBWF6231IPHV-picard-mark-duplicates-step](/analysis-steps/PKBWF6231IPHV-picard-mark-duplicates-step/) has deleted subobject award [U24DK13851](/awards/U24DK13851/).",
                "level": 30,
                "level_name": "INTERNAL_ACTION",
                "name": "audit_item_status",
                "path": "/analysis-steps/PKBWF6231IPHV-picard-mark-duplicates-step/"
            }
        ]
    },
    "award": {
        "@id": "/awards/U24DK13851/",
        "component": "data coordination"
    },
    "creation_timestamp": "2024-12-04T19:02:17.740409+00:00",
    "description": "Identifies duplicate reads. This tool locates and tags duplicate reads in a BAM or SAM file, where duplicate reads are defined as originating from a single fragment of DNA.",
    "input_content_types": [
        "alignments"
    ],
    "lab": {
        "@id": "/labs/pankbase-consortium/",
        "title": "Pankbase Consortium, PanKbase"
    },
    "name": "PKBWF6231IPHV-picard-mark-duplicates-step",
    "output_content_types": [
        "alignments"
    ],
    "parents": [
        {
            "@id": "/analysis-steps/PKBWF6231IPHV-star-alignment-step/",
            "title": "RNAseq GTEx pipeline STAR alignment step"
        }
    ],
    "release_timestamp": "2025-01-10T07:46:12.895334+00:00",
    "schema_version": "5",
    "status": "released",
    "step_label": "picard-mark-duplicates-step",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "summary": "52981da7-dfea-4595-84d5-7373b07f8361",
    "title": "RNAseq GTEx pipeline Picard mark duplicates step",
    "uuid": "52981da7-dfea-4595-84d5-7373b07f8361",
    "workflow": {
        "@id": "/workflows/PKBWF6231IPHV/",
        "accession": "PKBWF6231IPHV"
    }
}