Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
Analysis Set
/
PKBDS9727AJRG
PKBDS9727AJRG
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-072
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic alpha cell of islet biosample from human donor SAMN19842601 in the HPAP database HPAP-072
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM2980ILIJ
PrimaryCell
pancreatic A cell
pancreatic A cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO1659RTUG
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS6182GKPN
bulk RNA-seq assay (RNA-seq)
PKBSM2980ILIJ
pancreatic A cell, male, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI0488GWIJ
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI1772IGOB
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI4182MPEG
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI5095WOUL
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI7020OQYS
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI7341VNJG
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI7466AVAO
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI8543QGDP
txt
QC metrics
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217