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Analysis Set
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PKBDS7673AOTB
PKBDS7673AOTB
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-036
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN19776467 in the HPAP database HPAP-036
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM2264WXPT
PrimaryCell
type B pancreatic cell
type B pancreatic cell, female, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO8720AZSL
female
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS4097HTFC
bulk RNA-seq assay (RNA-seq)
PKBSM2264WXPT
type B pancreatic cell, female, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI1012JJIA
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI2390PIYV
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI3238KFXM
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI4565CQOF
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI5000CSJC
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI5428IHUB
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI5519EGIT
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI8874GDZA
bam
alignments
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217