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Analysis Set
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PKBDS4155RNPA
PKBDS4155RNPA
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-018
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN19776449 in the HPAP database HPAP-018
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM1855BYWV
PrimaryCell
type B pancreatic cell
type B pancreatic cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO0285ZWBE
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS2326SHPI
bulk RNA-seq assay (RNA-seq)
PKBSM1855BYWV
type B pancreatic cell, male, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI0155ITEM
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI0685QFAH
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI3918ATTH
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI4151JCCX
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI5363RFFX
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI6679TKPP
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI7150RTBH
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI7441ULPP
tsv
element quantifications
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217