Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
Analysis Set
/
PKBDS4148YXCW
PKBDS4148YXCW
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-077
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN19842606 in the HPAP database HPAP-077
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM9628GAWX
PrimaryCell
type B pancreatic cell
type B pancreatic cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO4471URAT
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS2190LHHK
bulk RNA-seq assay (RNA-seq)
PKBSM9628GAWX
type B pancreatic cell, male, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI2482FDSI
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI3374FWCH
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI3916KVKH
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI6348ZAPE
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI7351JOVC
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI7360QANK
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI8174OEBB
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI9036FMGJ
tsv
element quantifications
Klaus Kaestner, UPenn
validated
Attribution
Funding
U01DK123594