PKBDS2543KRSS
File Set Type
intermediate analysis
Annotation Type
Per-sample processed islet scRNA-seq
Annotation Category
Gene expression
Submitter Comment
SRR27326993
Description
Analysis set of scRNA-seq for islet biosample of human donor SAMN29494287 from IIDP with HTO (SRR27326993)
SamplesReport view
6 items
Sample Terms
Summary
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM thapsigargin for 4 hours
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM thapsigargin for 2 hours
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM Dimethyl sulfoxide for 4 hours
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM thapsigargin for 24 hours
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM Dimethyl sulfoxide for 24 hours
PrimaryIslet
islet of Langerhans cell, Male, Homo sapiens treated with 0 μM no treatment
Donors
1 item
Files
25 items
txt
QC metrics
1.2 MB
June 15, 2025
validated
bam
alignments
61 GB
June 15, 2025
validated
txt
barcode to element mapping
101 KB
June 15, 2025
validated
txt
QC metrics
1.2 MB
June 15, 2025
validated
txt
QC metrics
1.2 MB
June 15, 2025
validated
h5ad
sparse gene count matrix
63 MB
June 15, 2025
validated
bam
alignments
32 GB
June 15, 2025
validated
txt
QC metrics
2.0 KB
June 15, 2025
validated
h5ad
sparse gene count matrix
59 MB
June 15, 2025
validated
txt
QC metrics
125 B
June 15, 2025
validated
Attribution
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies
