PKBDS2514INCD
File Set Type
intermediate analysis
Submitter Comment
SAMN08768781__rep2__no_treatment
Summary
intermediate analysis of scRNA-seq data
Description
Analysis set of scRNA-seq for islet biosample of human donor SAMN08768781 from IIDP with no_treatment (SAMN08768781__rep2__no_treatment)
Samples
1 item
Accession
Type
Sample Terms
Summary
PrimaryIslet
islet of Langerhans cell, male, Homo sapiens
Donors
1 item
MeasurementSet Input File Sets
1 item
Measurement Sets
Measured Samples
single-cell RNA sequencing assay (scRNA-seq)
islet of Langerhans cell, male, Homo sapiens
Files
25 items
mtx
sparse gene count matrix
Joyce Niland, CoH
validated
mtx
sparse gene count matrix
Joyce Niland, CoH
validated
csv
sequence barcodes
Joyce Niland, CoH
validated
h5ad
sparse gene count matrix
Joyce Niland, CoH
validated
bam
alignments
Joyce Niland, CoH
validated
csv
QC metrics
Joyce Niland, CoH
validated
txt
QC metrics
Joyce Niland, CoH
validated
csv
QC metrics
Joyce Niland, CoH
validated
txt
QC metrics
Joyce Niland, CoH
validated
tsv
barcode to element mapping
Joyce Niland, CoH
validated
Attribution
Funding
Supported by National Institutes of Health (NIH) grants U24 DK138515, U24 DK138512
Supplemental funds from the NIH Office of Data Science Strategies
Supplemental funds from the NIH Office of Data Science Strategies