Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
Analysis Set
/
PKBDS1880UJMX
PKBDS1880UJMX
released
Json view
File Set Type
intermediate analysis
Submitter Comment
HPAP-022__rep1__no_treatment
Summary
intermediate analysis of scRNA-seq data
Description
Analysis set of scRNA-seq for islet biosample of human donor HPAP-022 from HPAP with no_treatment (HPAP-022__rep1__no_treatment)
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM4126RWLD
PrimaryIslet
islet of Langerhans
islet of Langerhans cell, female, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO2364QVNX
female
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS7435GVKG
single-cell RNA sequencing assay (scRNA-seq)
PKBSM4126RWLD
islet of Langerhans cell, female, Homo sapiens
Files
25 items
1
2
3
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI0719TWVR
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI0927ZJSP
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI0993EIFS
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI1295OBOO
csv
sequence barcodes
Klaus Kaestner, UPenn
validated
PKBFI1844GOEK
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI2200PBIE
h5ad
sparse gene count matrix
Klaus Kaestner, UPenn
validated
PKBFI2337KVXJ
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI2401WABD
tsv
barcode to element mapping
Klaus Kaestner, UPenn
validated
PKBFI2739FUPI
h5ad
sparse gene count matrix
Klaus Kaestner, UPenn
validated
PKBFI3200HXBD
txt
QC metrics
Klaus Kaestner, UPenn
validated
Attribution
Funding
UC4DK112217