PKBDS1378VISS

{
    "@context": "/terms/",
    "@id": "/analysis-sets/PKBDS1378VISS/",
    "@type": [
        "AnalysisSet",
        "FileSet",
        "Item"
    ],
    "accession": "PKBDS1378VISS",
    "aliases": [
        "pankbase-consortium:PA_DE_phenotype_Delta_ND_vs_T2D"
    ],
    "audit": {
        "WARNING": [
            {
                "category": "missing derived from",
                "detail": "Analysis set [PKBDS1378VISS](/analysis-sets/PKBDS1378VISS/) links to file(s) [PKBFI4717JSAM](/tabular-files/PKBFI4717JSAM/), [PKBFI8658KHHS](/matrix-files/PKBFI8658KHHS/) that have no `derived_from`. Files in an analysis set are expected to be derived from other files.",
                "level": 40,
                "level_name": "WARNING",
                "name": "audit_input_file_sets_derived_from",
                "path": "/analysis-sets/PKBDS1378VISS/"
            }
        ]
    },
    "award": {
        "@id": "/awards/U24DK138512-DK138515/",
        "component": "data coordination",
        "title": "A Data and Administrative Coordinating Center for the PanKbase Consortium U24DK138512-DK138515"
    },
    "control_for": [],
    "creation_timestamp": "2025-11-03T22:28:19.470711+00:00",
    "description": "Differential expression results testing association with type 2 diabetes in pancreatic delta cells",
    "file_set_type": "principal analysis",
    "files": [
        {
            "@id": "/tabular-files/PKBFI4717JSAM/",
            "accession": "PKBFI4717JSAM",
            "aliases": [
                "pankbase-consortium:PA_DE_phenotype_Delta_ND_vs_T2D_tsv"
            ],
            "content_type": "differential gene expression quantifications",
            "creation_timestamp": "2025-11-03T22:41:25.020933+00:00",
            "file_format": "tsv",
            "href": "/tabular-files/PKBFI4717JSAM/@@download/PKBFI4717JSAM.tsv.gz"
        },
        {
            "@id": "/matrix-files/PKBFI8658KHHS/",
            "accession": "PKBFI8658KHHS",
            "aliases": [
                "pankbase-consortium:PA_DE_phenotype_Delta_ND_vs_T2D_RUV-normalizedCounts"
            ],
            "content_type": "sparse gene count matrix",
            "creation_timestamp": "2025-11-11T00:41:18.678234+00:00",
            "file_format": "mtx",
            "href": "/matrix-files/PKBFI8658KHHS/@@download/PKBFI8658KHHS.mtx"
        }
    ],
    "input_file_set_for": [],
    "lab": {
        "@id": "/labs/pankbase-consortium/",
        "title": "Pankbase Consortium, PanKbase"
    },
    "release_timestamp": "2025-11-11T01:11:00.262690+00:00",
    "schema_version": "8",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitted_files_timestamp": "2025-11-03T22:41:25.020933+00:00",
    "summary": "principal analysis of data",
    "uuid": "d38f5984-1687-4e47-a6b0-7d3de8eee090"
}