Funding Opportunities
Home
User Guide
Scripts
Schema
PanKgraph
Integrated Cell Browser
Data
Donor Summary
Funding Opportunities
Data Library
User Guide
Scripts
Schema
APIs
Resources
Integrated Cell Browser
Differential Gene Expression Browser
PCA Explorer
Analytical Library
Metadata Standards
Tools | Pipelines
Publications
About
Project
People
Policies
Related Programs
Collaborate
Help
Contact | Feedback
Tutorials
GitHub
News
Home
/
Analysis Set
/
PKBDS0129CKFP
PKBDS0129CKFP
released
Json view
File Set Type
intermediate analysis
Publication Identifiers
PMID:31127054
,
PMCID:PMC6609987
,
doi:10.2337/db19-0058
,
PMID:36206763
,
PMCID:PMC9742126
,
doi:10.1016/j.cmet.2022.09.013
Submitter Comment
HPAP-075
Summary
intermediate analysis of RNA-seq data
Description
Analysis set of RNA-seq for pancreatic exocrine cell of islet biosample from human donor SAMN19842604 in the HPAP database HPAP-075
Samples
1 item
Accession
Type
Sample Terms
Summary
PKBSM6001XGEK
PrimaryCell
exocrine cell
exocrine cell, male, Homo sapiens
Donors
1 item
Accession
Gender
Taxa
PKBDO3766WPNY
male
Homo sapiens
MeasurementSet Input File Sets
Show aliases columns
1 item
Measurement Sets
Measured Samples
PKBDS1914JOMO
bulk RNA-seq assay (RNA-seq)
PKBSM6001XGEK
exocrine cell, male, Homo sapiens
Files
8 items
Accession
File Format
Content Type
Lab
File Size
Upload Status
PKBFI1340XVJO
bam
alignments
Klaus Kaestner, UPenn
validated
PKBFI2878AHPY
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI4943QEVE
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI4946GWWU
txt
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI5295RQMY
tsv
QC metrics
Klaus Kaestner, UPenn
validated
PKBFI6059GDUQ
bam
transcriptome alignments
Klaus Kaestner, UPenn
validated
PKBFI6072DVMP
tsv
element quantifications
Klaus Kaestner, UPenn
validated
PKBFI8173QRAO
bam
alignments
Klaus Kaestner, UPenn
validated
Attribution
Funding
U01DK123594