The binary file from STAR is a coordinate-sorted BAM file containing aligned RNA-seq reads, ready for downstream analysis such as quantification or variant calling.

Klaus Kaestner, UPenn

Ying Sun

Penn Human Pancreas Procurement and Analysis Program Abstract Utilizing our existing infrastructure and scientific collaborations, we have assembled 6 cores with expertise ranging from pancreas procurement and islet isolation to data integration for a comprehensive and integrated Human Pancreas Procurement and Analysis Program based at the University of Pennsylvania.

UC4DK112217

PENN INTEGRATED HUMAN PANCREAS PROCUREMENT AND ANALYSIS PROGRAM

Klaus Kaestner

U01DK123594

UC4DK112232

The Kaestner Lab is part of the Department of Genetics and Institute for Diabetes, Obesity, and Metabolism at the University of Pennsylvania.

klaus-kaestner

audit_input_file_sets_derived_from

audit_sample_sorted_from_parent_child_check

audit_item_schema

audit_tier2_fields

audit_tier3_fields

audit_biosample_age

THE HUMAN PANCREAS ANALYSIS PROGRAM FOR TYPE 2 DIABETES

Analysis set of RNA-seq for pancreatic beta cell of islet biosample from human donor SAMN19842606 in the HPAP database HPAP-077

type B pancreatic cell, male, Homo sapiens

PKBFI8174OEBB

Alignment Details

Attribution