PKBFI5585JOFW

{
    "@context": "/terms/",
    "@id": "/alignment-files/PKBFI5585JOFW/",
    "@type": [
        "AlignmentFile",
        "File",
        "Item"
    ],
    "accession": "PKBFI5585JOFW",
    "aliases": [
        "klaus-kaestner:HPAP_scRNAseq_HPAP-072_no_treatment_Alignment_.before-dedup.bam"
    ],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/UC4DK112217/"
    },
    "content_summary": "filtered alignments",
    "content_type": "alignments",
    "controlled_access": false,
    "creation_timestamp": "2025-05-16T16:59:17.077505+00:00",
    "derived_from": [
        "/alignment-files/PKBFI4901OWPF/"
    ],
    "file_format": "bam",
    "file_set": "/analysis-sets/PKBDS6939NVNR/",
    "file_url": "https://pankbase-data-v1.s3.us-west-2.amazonaws.com/processed_data/single_cell_RNA/HPAP_gencode_v39/prune/HPAP-072-hg38.before-dedup.bam",
    "filtered": true,
    "gene_list_for": [],
    "href": "/alignment-files/PKBFI5585JOFW/@@download/PKBFI5585JOFW.bam",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/klaus-kaestner/",
        "title": "Klaus Kaestner, UPenn"
    },
    "loci_list_for": [],
    "md5sum": "20c7b380a2abca6e7d1f7a5a0dc4fcd7",
    "redacted": false,
    "reference_files": [
        "/reference-files/PKBFI6475GTLH/",
        "/reference-files/PKBFI0723SUOK/"
    ],
    "release_timestamp": "2025-06-15T05:44:16.706967+00:00",
    "schema_version": "11",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "HPAP-072",
    "summary": "GRCh38 filtered alignments",
    "upload_status": "validated",
    "uuid": "ccf4a6f8-1df8-440a-8ea8-1aabe3f7afcb"
}