PKBFI4894IASZ

{
    "@context": "/terms/",
    "@id": "/alignment-files/PKBFI4894IASZ/",
    "@type": [
        "AlignmentFile",
        "File",
        "Item"
    ],
    "accession": "PKBFI4894IASZ",
    "aliases": [
        "joyce-niland:IIDP_scRNAseq_SAMN08768783__rep1__no_treatment_no_treatment_Alignment_before-dedup.bam"
    ],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/U24DK098085/"
    },
    "content_summary": "filtered alignments",
    "content_type": "alignments",
    "controlled_access": false,
    "creation_timestamp": "2025-05-16T17:01:23.781691+00:00",
    "derived_from": [
        "/alignment-files/PKBFI6714RTDL/"
    ],
    "file_format": "bam",
    "file_set": "/analysis-sets/PKBDS0985GXTS/",
    "file_url": "https://pankbase-data-v1.s3.us-west-2.amazonaws.com/processed_data/single_cell_RNA/202503_freeze_intermediate_files/prune/SAMN08768783__rep1__no_treatment-hg38.before-dedup.bam",
    "filtered": true,
    "gene_list_for": [],
    "href": "/alignment-files/PKBFI4894IASZ/@@download/PKBFI4894IASZ.bam",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/joyce-niland/",
        "title": "Joyce Niland, CoH"
    },
    "loci_list_for": [],
    "md5sum": "a08e3a51d82110b94c90df0f4229adfe",
    "redacted": false,
    "reference_files": [
        "/reference-files/PKBFI6475GTLH/",
        "/reference-files/PKBFI0723SUOK/"
    ],
    "release_timestamp": "2025-06-15T05:47:21.257265+00:00",
    "schema_version": "11",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "SAMN08768783__rep1__no_treatment",
    "summary": "GRCh38 filtered alignments",
    "upload_status": "validated",
    "uuid": "8bf58b87-7753-4a6d-9fdf-02eca119f6f3"
}