PKBFI4625GGQG

{
    "@context": "/terms/",
    "@id": "/alignment-files/PKBFI4625GGQG/",
    "@type": [
        "AlignmentFile",
        "File",
        "Item"
    ],
    "accession": "PKBFI4625GGQG",
    "aliases": [
        "klaus-kaestner:HPAP_scRNAseq_HPAP-066_SRR12831418_infected_with_SARS-CoV-2_Alignment_before-dedup.bam"
    ],
    "assembly": "GRCh38",
    "audit": {},
    "award": {
        "@id": "/awards/U01DK123594/"
    },
    "content_summary": "filtered alignments",
    "content_type": "alignments",
    "controlled_access": false,
    "creation_timestamp": "2025-05-19T18:54:14.819913+00:00",
    "derived_from": [
        "/alignment-files/PKBFI6505TLMQ/"
    ],
    "file_format": "bam",
    "file_set": "/analysis-sets/PKBDS1021PKFK/",
    "file_url": "https://pankbase-data-v1.s3.us-west-2.amazonaws.com/processed_data/single_cell_RNA/Prodo_gencode_v39/prune/SRR12831418-hg38.before-dedup.bam",
    "filtered": true,
    "gene_list_for": [],
    "href": "/alignment-files/PKBFI4625GGQG/@@download/PKBFI4625GGQG.bam",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/klaus-kaestner/",
        "title": "Klaus Kaestner, UPenn"
    },
    "loci_list_for": [],
    "md5sum": "fb516b7fd981fba5aed2ab0424308e34",
    "redacted": false,
    "reference_files": [
        "/reference-files/PKBFI6475GTLH/",
        "/reference-files/PKBFI0723SUOK/"
    ],
    "release_timestamp": "2025-06-15T05:49:00.336928+00:00",
    "schema_version": "11",
    "status": "released",
    "submitted_by": {
        "@id": "/users/5e3038c4-baa5-4589-b3d8-ad2fe634e826/",
        "title": "Ying Sun"
    },
    "submitter_comment": "SRR12831418",
    "summary": "GRCh38 filtered alignments",
    "upload_status": "validated",
    "uuid": "6c7a2f3d-0156-4d6a-a26f-a0f3e4ebb1da"
}